Package `hocort`

Expand source code

import os
import sys


# check if user has root access, don't allow to install or run HoCoRT with root access
if os.environ.get("SUDO_UID"):
    print('Attempting to run HoCoRT with root privileges. Exiting.')
    sys.exit(1)

Sub-modules

hocort.aligners
hocort.dependencies
hocort.execute: Executes commands as subprocesses at the OS level.
hocort.interface: Command line user interface for HoCoRT.
hocort.logging
hocort.parse
hocort.pipelines
hocort.version: A file for storing version and last_modified variables.