Expand source code
from hocort.pipelines.bowtie2 import Bowtie2 as bowtie2
from hocort.pipelines.bwa_mem2 import BWA_MEM2 as bwamem2
from hocort.pipelines.hisat2 import HISAT2 as hisat2
from hocort.pipelines.minimap2 import Minimap2 as minimap2
from hocort.pipelines.kraken2 import Kraken2 as kraken2
from hocort.pipelines.biobloom import BioBloom as biobloom
from hocort.pipelines.kraken2_bowtie2 import Kraken2Bowtie2 as kraken2bowtie2
from hocort.pipelines.kraken2_hisat2 import Kraken2HISAT2 as kraken2hisat2
from hocort.pipelines.kraken2_minimap2 import Kraken2Minimap2 as kraken2minimap2
from hocort.pipelines.bbmap import BBMap as bbmap